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imaris 3d coordinate  (Oxford Instruments)
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Oxford Instruments imaris 3d coordinate
(Aa,Ab) Changes in protrusion morphology of migrating PrE cells over time via green channel and bright field (BF) in <t>3D</t> and 2D views. White arrows indicate migrating pioneer cells, with protrusions denoted by green arrows in the enlarged 3D viewer. Blue and red spots highlighted by white circles, added <t>via</t> <t>IMARIS,</t> confirm cell positions. Scale bar: 20μm. (B) Total embryo cell counts at the observation of the first migration cells featuring protrusions. (C) The timing of migration initiation in embryonic developmental day. In both (B,C), Mann Whitney test was employed. Error bars: SD. “Ff” denotes freshly flushed, mirroring the in-vivo group, and “CM” reflects the in-vitro group. Statistical significance: p = 0.05, * p < 0.05 and *** p < 0.001. The embryo sample size: Seven (three litters) for the in-vivo group and 10 (three videos across four litters) for the in-vitro group.
Imaris 3d Coordinate, supplied by Oxford Instruments, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/3d+coordinate/Imaris/bio_rxiv__64898__2025__12__15__691388-165-1-1
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imaris 3d coordinate - by Bioz Stars, 2026-10
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3d coordinates of cb1 receptor complexes  (Databank Inc)
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Databank Inc 3d coordinates of cb1 receptor complexes
(Aa,Ab) Changes in protrusion morphology of migrating PrE cells over time via green channel and bright field (BF) in <t>3D</t> and 2D views. White arrows indicate migrating pioneer cells, with protrusions denoted by green arrows in the enlarged 3D viewer. Blue and red spots highlighted by white circles, added <t>via</t> <t>IMARIS,</t> confirm cell positions. Scale bar: 20μm. (B) Total embryo cell counts at the observation of the first migration cells featuring protrusions. (C) The timing of migration initiation in embryonic developmental day. In both (B,C), Mann Whitney test was employed. Error bars: SD. “Ff” denotes freshly flushed, mirroring the in-vivo group, and “CM” reflects the in-vitro group. Statistical significance: p = 0.05, * p < 0.05 and *** p < 0.001. The embryo sample size: Seven (three litters) for the in-vivo group and 10 (three videos across four litters) for the in-vitro group.
3d Coordinates Of Cb1 Receptor Complexes, supplied by Databank Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/3d+coordinate/3d+coordinates+of+cb1+receptor+complexes/pmc12273586-88-1-16
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3d coordinate measurement machine (cmm)-type devices mitutoyo qv apex 302  (Mitutoyo)
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(Aa,Ab) Changes in protrusion morphology of migrating PrE cells over time via green channel and bright field (BF) in <t>3D</t> and 2D views. White arrows indicate migrating pioneer cells, with protrusions denoted by green arrows in the enlarged 3D viewer. Blue and red spots highlighted by white circles, added <t>via</t> <t>IMARIS,</t> confirm cell positions. Scale bar: 20μm. (B) Total embryo cell counts at the observation of the first migration cells featuring protrusions. (C) The timing of migration initiation in embryonic developmental day. In both (B,C), Mann Whitney test was employed. Error bars: SD. “Ff” denotes freshly flushed, mirroring the in-vivo group, and “CM” reflects the in-vitro group. Statistical significance: p = 0.05, * p < 0.05 and *** p < 0.001. The embryo sample size: Seven (three litters) for the in-vivo group and 10 (three videos across four litters) for the in-vitro group.
3d Coordinate Measurement Machine (Cmm) Type Devices Mitutoyo Qv Apex 302, supplied by Mitutoyo, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/3d+coordinate/quick+vision+computerized+numerical+control++cnc++measuring+system/pm40141638-62-7-7
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3d coordinate measurement machine (cmm)-type devices mitutoyo qv apex 302 - by Bioz Stars, 2026-10
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3d space coordinates  (ANSYS inc)
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ANSYS inc 3d space coordinates
(Aa,Ab) Changes in protrusion morphology of migrating PrE cells over time via green channel and bright field (BF) in <t>3D</t> and 2D views. White arrows indicate migrating pioneer cells, with protrusions denoted by green arrows in the enlarged 3D viewer. Blue and red spots highlighted by white circles, added <t>via</t> <t>IMARIS,</t> confirm cell positions. Scale bar: 20μm. (B) Total embryo cell counts at the observation of the first migration cells featuring protrusions. (C) The timing of migration initiation in embryonic developmental day. In both (B,C), Mann Whitney test was employed. Error bars: SD. “Ff” denotes freshly flushed, mirroring the in-vivo group, and “CM” reflects the in-vitro group. Statistical significance: p = 0.05, * p < 0.05 and *** p < 0.001. The embryo sample size: Seven (three litters) for the in-vivo group and 10 (three videos across four litters) for the in-vitro group.
3d Space Coordinates, supplied by ANSYS inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/3d+coordinate/3d+space+coordinates/pm39797868-76-2-5
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3d coordinate files  (Accelrys)
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Accelrys 3d coordinate files
(Aa,Ab) Changes in protrusion morphology of migrating PrE cells over time via green channel and bright field (BF) in <t>3D</t> and 2D views. White arrows indicate migrating pioneer cells, with protrusions denoted by green arrows in the enlarged 3D viewer. Blue and red spots highlighted by white circles, added <t>via</t> <t>IMARIS,</t> confirm cell positions. Scale bar: 20μm. (B) Total embryo cell counts at the observation of the first migration cells featuring protrusions. (C) The timing of migration initiation in embryonic developmental day. In both (B,C), Mann Whitney test was employed. Error bars: SD. “Ff” denotes freshly flushed, mirroring the in-vivo group, and “CM” reflects the in-vitro group. Statistical significance: p = 0.05, * p < 0.05 and *** p < 0.001. The embryo sample size: Seven (three litters) for the in-vivo group and 10 (three videos across four litters) for the in-vitro group.
3d Coordinate Files, supplied by Accelrys, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/3d+coordinate/3d+coordinate+files/10__33263_slash_briac146__143-53-6-10
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3d coordinates of point clouds  (BARCO Inc)
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BARCO Inc 3d coordinates of point clouds
(Aa,Ab) Changes in protrusion morphology of migrating PrE cells over time via green channel and bright field (BF) in <t>3D</t> and 2D views. White arrows indicate migrating pioneer cells, with protrusions denoted by green arrows in the enlarged 3D viewer. Blue and red spots highlighted by white circles, added <t>via</t> <t>IMARIS,</t> confirm cell positions. Scale bar: 20μm. (B) Total embryo cell counts at the observation of the first migration cells featuring protrusions. (C) The timing of migration initiation in embryonic developmental day. In both (B,C), Mann Whitney test was employed. Error bars: SD. “Ff” denotes freshly flushed, mirroring the in-vivo group, and “CM” reflects the in-vitro group. Statistical significance: p = 0.05, * p < 0.05 and *** p < 0.001. The embryo sample size: Seven (three litters) for the in-vivo group and 10 (three videos across four litters) for the in-vitro group.
3d Coordinates Of Point Clouds, supplied by BARCO Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/3d+coordinate/3d+coordinates+of+point+clouds/10__1016_slash_j__jreng__2024__04__009-251-5-14
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3d coordinate system  (Geomagic Inc)
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(Aa,Ab) Changes in protrusion morphology of migrating PrE cells over time via green channel and bright field (BF) in <t>3D</t> and 2D views. White arrows indicate migrating pioneer cells, with protrusions denoted by green arrows in the enlarged 3D viewer. Blue and red spots highlighted by white circles, added <t>via</t> <t>IMARIS,</t> confirm cell positions. Scale bar: 20μm. (B) Total embryo cell counts at the observation of the first migration cells featuring protrusions. (C) The timing of migration initiation in embryonic developmental day. In both (B,C), Mann Whitney test was employed. Error bars: SD. “Ff” denotes freshly flushed, mirroring the in-vivo group, and “CM” reflects the in-vitro group. Statistical significance: p = 0.05, * p < 0.05 and *** p < 0.001. The embryo sample size: Seven (three litters) for the in-vivo group and 10 (three videos across four litters) for the in-vitro group.
3d Coordinate System, supplied by Geomagic Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/3d+coordinate/3d+coordinate+system/pm39426314-117-1-11
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3d coordinate measurement system  (Leitz GmbH)
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Leitz GmbH 3d coordinate measurement system
(Aa,Ab) Changes in protrusion morphology of migrating PrE cells over time via green channel and bright field (BF) in <t>3D</t> and 2D views. White arrows indicate migrating pioneer cells, with protrusions denoted by green arrows in the enlarged 3D viewer. Blue and red spots highlighted by white circles, added <t>via</t> <t>IMARIS,</t> confirm cell positions. Scale bar: 20μm. (B) Total embryo cell counts at the observation of the first migration cells featuring protrusions. (C) The timing of migration initiation in embryonic developmental day. In both (B,C), Mann Whitney test was employed. Error bars: SD. “Ff” denotes freshly flushed, mirroring the in-vivo group, and “CM” reflects the in-vitro group. Statistical significance: p = 0.05, * p < 0.05 and *** p < 0.001. The embryo sample size: Seven (three litters) for the in-vivo group and 10 (three videos across four litters) for the in-vitro group.
3d Coordinate Measurement System, supplied by Leitz GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/3d+coordinate/3d+coordinate+measurement+system/pmc11573162-79-20-27
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3d coordinate text files  (MathWorks Inc)
90
MathWorks Inc 3d coordinate text files
(Aa,Ab) Changes in protrusion morphology of migrating PrE cells over time via green channel and bright field (BF) in <t>3D</t> and 2D views. White arrows indicate migrating pioneer cells, with protrusions denoted by green arrows in the enlarged 3D viewer. Blue and red spots highlighted by white circles, added <t>via</t> <t>IMARIS,</t> confirm cell positions. Scale bar: 20μm. (B) Total embryo cell counts at the observation of the first migration cells featuring protrusions. (C) The timing of migration initiation in embryonic developmental day. In both (B,C), Mann Whitney test was employed. Error bars: SD. “Ff” denotes freshly flushed, mirroring the in-vivo group, and “CM” reflects the in-vitro group. Statistical significance: p = 0.05, * p < 0.05 and *** p < 0.001. The embryo sample size: Seven (three litters) for the in-vivo group and 10 (three videos across four litters) for the in-vitro group.
3d Coordinate Text Files, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/3d+coordinate/pm38695825-42-24-22
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Image Search Results


(Aa,Ab) Changes in protrusion morphology of migrating PrE cells over time via green channel and bright field (BF) in 3D and 2D views. White arrows indicate migrating pioneer cells, with protrusions denoted by green arrows in the enlarged 3D viewer. Blue and red spots highlighted by white circles, added via IMARIS, confirm cell positions. Scale bar: 20μm. (B) Total embryo cell counts at the observation of the first migration cells featuring protrusions. (C) The timing of migration initiation in embryonic developmental day. In both (B,C), Mann Whitney test was employed. Error bars: SD. “Ff” denotes freshly flushed, mirroring the in-vivo group, and “CM” reflects the in-vitro group. Statistical significance: p = 0.05, * p < 0.05 and *** p < 0.001. The embryo sample size: Seven (three litters) for the in-vivo group and 10 (three videos across four litters) for the in-vitro group.

Journal: bioRxiv

Article Title: Cross Sectional and Longitudinal Imaging Reveals Spatiotemporal Divergence in Morphogenesis and Cell Lineage Specification between in-vivo and in-vitro Mouse Embryo during Pre- and Peri-implantation

doi: 10.64898/2025.12.15.691388

Figure Lengend Snippet: (Aa,Ab) Changes in protrusion morphology of migrating PrE cells over time via green channel and bright field (BF) in 3D and 2D views. White arrows indicate migrating pioneer cells, with protrusions denoted by green arrows in the enlarged 3D viewer. Blue and red spots highlighted by white circles, added via IMARIS, confirm cell positions. Scale bar: 20μm. (B) Total embryo cell counts at the observation of the first migration cells featuring protrusions. (C) The timing of migration initiation in embryonic developmental day. In both (B,C), Mann Whitney test was employed. Error bars: SD. “Ff” denotes freshly flushed, mirroring the in-vivo group, and “CM” reflects the in-vitro group. Statistical significance: p = 0.05, * p < 0.05 and *** p < 0.001. The embryo sample size: Seven (three litters) for the in-vivo group and 10 (three videos across four litters) for the in-vitro group.

Article Snippet: An IMARIS 3D coordinate was then established with its origin aligned to P-TE apex.

Techniques: Migration, MANN-WHITNEY, In Vivo, In Vitro

(A) Sample sizes of in-vivo (blue) and in-vitro (green) embryos and Sox2- and Gata4-ICM cells. (B) Distance measurement between cells and the XY plane. The XY plane is set at the level of the P-TE apex and is oriented horizontally, perpendicular to the embryonic-abembryonic axis. The Z-axis runs parallel to the embryonic-abembryonic direction. The origin of the 3D coordinate system is at the P-TE apex, and “depth” refers to the distance of the cells from the XY plane along the Z-axis. (Ca,Cb) Depth of Gata4- (red) and Sox2-positive (grey) cells in vivo at E3.75 and E4.5, respectively. (Dc-e) As (C) but for E3.75, E4.375 and E4.5 in vitro .

Journal: bioRxiv

Article Title: Cross Sectional and Longitudinal Imaging Reveals Spatiotemporal Divergence in Morphogenesis and Cell Lineage Specification between in-vivo and in-vitro Mouse Embryo during Pre- and Peri-implantation

doi: 10.64898/2025.12.15.691388

Figure Lengend Snippet: (A) Sample sizes of in-vivo (blue) and in-vitro (green) embryos and Sox2- and Gata4-ICM cells. (B) Distance measurement between cells and the XY plane. The XY plane is set at the level of the P-TE apex and is oriented horizontally, perpendicular to the embryonic-abembryonic axis. The Z-axis runs parallel to the embryonic-abembryonic direction. The origin of the 3D coordinate system is at the P-TE apex, and “depth” refers to the distance of the cells from the XY plane along the Z-axis. (Ca,Cb) Depth of Gata4- (red) and Sox2-positive (grey) cells in vivo at E3.75 and E4.5, respectively. (Dc-e) As (C) but for E3.75, E4.375 and E4.5 in vitro .

Article Snippet: An IMARIS 3D coordinate was then established with its origin aligned to P-TE apex.

Techniques: In Vivo, In Vitro